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16 Article(s) on File
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Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection
Albert FW,
Hodges E,
Jensen JD,
Besnier F,
Xuan ZY,
Rooks M,
Bhattacharjee A,
Brizuela L,
Good JM,
Green RE,
Burbano HA,
Plyusnina IZ,
Trut L,
Andersson L,
Schoneberg T,
Carlborg O,
Hannon GJ,
Paabo S

Heredity
  107 (3): 205-214; Sep 2011  
[Abstract]
[DOI] [Full Text]

Chaperonins Facilitate KNOTTED1 Cell-to-Cell Trafficking and Stem Cell Function
Xu XM,
Wang J,
Xuan ZY,
Goldshmidt A,
Borrill PG,
Hariharan N,
Kim JY,
Jackson DP

Science
  333 (6046): 1141-1144; Aug 26 2011   NLM
[Abstract]
[DOI]

Deregulation of Scribble Promotes Mammary Tumorigenesis and Reveals a Role for Cell Polarity in Carcinoma
Zhan L,
Rosenberg A,
Bergami KC,
Yu M,
Xuan ZY,
Jaffe AB,
Allred C,
Muthuswamy SK

Cell
  135 (5): 865-878; Nov 26 2008   PMC3015046
[Abstract]
[DOI] [Full Text] [PDF]

Poly A- transcripts expressed in HeLa cells
Wu Q,
Kim YC,
Lu J,
Xuan ZY,
Chen J,
Zheng Y,
Zhou T,
Zhang MQ,
Wu CI,
Wang SM

PLoS ONE
  3 (7): e2803; Jul 30 2008   PMCID: PMC2481391
[Abstract]
[DOI] [Full Text] [PDF]

Scanning the human genome at kilobase resolution
Chen J,
Kim YC,
Jung YC,
Xuan ZY,
Dworkin G,
Zhang YM,
Zhang MQ,
Wang SM

Genome Res
  18 (5): 751-762; May 2008   PMCID: PMC2336809
[Abstract]
[DOI] [Full Text] [PDF]

Using quality scores and longer reads improves accuracy of Solexa read mapping
Smith AD,
Xuan ZY,
Zhang MQ

Bmc Bioinformatics
  9 (128): Feb 2008   PMCID: PMC2335322
[Abstract]
[DOI] [Full Text] [PDF]

A biochemical approach to identifying microRNA targets
Karginov FV,
Conaco C,
Xuan ZY,
Schmidt BH,
Parker JS,
Mandel G,
Hannon GJ

Proc Natl Acad Sci U S A
  104 (49): 19291-6; Dec 4 2007  
[Abstract]
[DOI] [Full Text] [PDF]

Genome-wide in situ exon capture for selective resequencing
Hodges E,
Xuan ZY,
Balija V,
Kramer MR,
Molla MN,
Smith SW,
Middle CM,
Rodesch MJ,
Albert TJ,
Hannon GJ,
McCombie WR

Nat Genet
  39 (12): 1522-7; Nov 4 2007  
[Abstract]
[DOI] [Full Text] [PDF]

Critical roles for Dicer in the female germline
Murchison EP,
Stein P,
Xuan ZY,
Pan H,
Zhang MQ,
Schultz RM,
Hannon GJ

Genes Dev
  21 (6): 682-93; Mar 15 2007  
[Abstract]
[DOI] [Full Text] [PDF]

Boosting with stumps for predicting transcription start sites
Zhao X,
Xuan ZY,
Zhang MQ

Genome Biol
  8 (2): R17; Feb 2 2007  
[Abstract]
[DOI] [Full Text] [PDF]

TRED: a transcriptional regulatory element database, new entries and other development
Jiang C,
Xuan ZY,
Zhao F,
Zhang MQ

Nucleic Acids Res
  35 (0): D137-D140; Jan 2007   PMCID: PMC1899102
[DOI] [Full Text] [PDF]

Computational prediction of methylation status in human genomic sequences
Das R,
Dimitrova N,
Xuan ZY,
Rollins RA,
Haghighi F,
Edwards JR,
Ju JY,
Bestor TH,
Zhang MQ

Proc Natl Acad Sci U S A
  103 (28): 10713-6; Jul 11 2006  
[Abstract]
[DOI] [Full Text] [PDF]

A clustering property of highly-degenerate transcription factor binding sites in the mammalian genome
Zhang C,
Xuan ZY,
Otto S,
Hover JR,
McCorkle SR,
Mandel G,
Zhang MQ

Nucleic Acids Res
  34 (8): 2238-46; 2006  
[Abstract]
[DOI] [Full Text] [PDF]

Regulating gene expression through RNA nuclear retention
Prasanth KV,
Prasanth SG,
Xuan ZY,
Hearn S,
Freier SM,
Bennett CF,
Zhang MQ,
Spector DL

Cell
  123 (2): 249-263; Oct 2005  
[Abstract]
[DOI] [Full Text] [PDF]

The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis
Carmell MA,
Xuan ZY,
Zhang MQ,
Hannon GJ

Genes Development
  16 (21): 2733-2742; Nov 2002  
[Full Text]

GFScan: A gene family search tool at genomic DNA level
Xuan ZY,
McCombie WR,
Zhang MQ

Genome Research
  12 (7): 1142-1149; Jul 2002  
[Full Text]


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