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13 Article(s) on File
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Differential sRNA Regulation in Leaves and Roots of Sugarcane under Water Depletion
Thiebaut F,
Grativol C,
Tanurdzic M,
Carnavale-Bottino M,
Vieira T,
Motta MR,
Rojas C,
Vincentini R,
Chabregas SM,
Hemerly AS,
Martienssen RA,
Ferreira PC

PLoS One
  9 (4): e93822; 2014   NLM
[Abstract]
[DOI] [Full Text]

Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
Vidal EA,
Moyano TC,
Krouk G,
Katari MS,
Tanurdzic M,
McCombie WR,
Coruzzi GM,
Gutierrez RA

BMC Genomics
  14 (0): 701; Oct 2013  
[Abstract]
[DOI] [Full Text]

Computational identification and analysis of novel sugarcane microRNAs
Thiebaut F,
Grativol C,
Carnavale-Bottino M,
Rojas CA,
Tanurdzic M,
Farinelli L,
Martienssen RA,
Hemerly AS,
Ferreira PC

BMC genomics
  13 (0): 290; Jul 2 2012  
[Abstract]
[DOI] [Full Text]

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks JA,
Nishiyama T,
Hasebe M,
Bowman JL,
Gribskov M,
Depamphilis C,
Albert VA,
Aono N,
Aoyama T,
Ambrose BA,
Ashton NW,
Axtell MJ,
Barker E,
Barker MS,
Bennetzen JL,
Bonawitz ND,
Chapple C,
Cheng C,
Correa LG,
Dacre M,
Debarry J,
Dreyer I,
Elias M,
Engstrom EM,
Estelle M,
Feng L,
Finet C,
Floyd SK,
Frommer WB,
Fujita T,
Gramzow L,
Gutensohn M,
Harholt J,
Hattori M,
Heyl A,
Hirai T,
Hiwatashi Y,
Ishikawa M,
Iwata M,
Karol KG,
Koehler B,
Kolukisaoglu U,
Kubo M,
Kurata T,
Lalonde S,
Li K,
Li Y,
Litt A,
Lyons E,
Manning G,
Maruyama T,
Michael TP,
Mikami K,
Miyazaki S,
Morinaga S,
Murata T,
Mueller-roeber B,
Nelson DR,
Obara M,
Oguri Y,
Olmstead RG,
Onodera N,
Petersen BL,
Pils B,
Prigge M,
Rensing SA,
Riaño-Pachón DM,
Roberts AW,
Sato Y,
Scheller HV,
Schulz B,
Schulz C,
Shakirov EV,
Shibagaki N,
Shinohara N,
Shippen DE,
Sørensen I,
Sotooka R,
Sugimoto N,
Sugita M,
Sumikawa N,
Tanurdzic M,
Theiben G,
Ulvskov P,
Wakazuki S,
Weng J,
Willats WW,
Wipf D,
Wolf PG,
Yang L,
Zimmer AD,
Zhu Q,
Mitros T,
Hellsten U,
Loqué D,
Otillar R,
Salamov A,
Schmutz J,
Shapiro H,
Lindquist E,
Lucas S,
Rokhsar D,
Grigoriev IV

Science
  332 (6032): 963-966; May 20 2011   PMC3166216
[Abstract]
[DOI]

Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state
Lee TJ,
Pascuzzi PE,
Settlage SB,
Shultz RW,
Tanurdzic M,
Rabinowicz PD,
Menges M,
Zheng P,
Main D,
Murray JA,
Sosinski B,
Allen GC,
Martienssen RA,
Hanley-Bowdoin L,
Vaughn MW,
Thompson WF

PLoS genetics
  6 (6): e1000982; Jun 2010  
[Abstract]
[DOI] [Full Text]

Epigenetic reprogramming and small RNA silencing of transposable elements in pollen
Slotkin RK,
Vaughn M,
Borges F,
Tanurdzic M,
Becker JD,
Feijo JA,
Martienssen RA

Cell
  136 (3): 461-72; Feb 6 2009  
[Abstract]
[DOI] [Full Text]

Epigenomic consequences of immortalized plant cell suspension culture
Tanurdzic M,
Vaughn MW,
Jiang H,
Lee TJ,
Slotkin RK,
Sosinski B,
Thompson WF,
Doerge RW,
Martienssen RA

PLoS biology
  6 (12): 2880-95; Dec 9 2008  
[Abstract]
[DOI] [Full Text]

ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription
Masuda HP,
Cabral LM,
De Veylder L,
Tanurdzic M,
de Almeida Engler J,
Geelen D,
Inze D,
Martienssen RA,
Ferreira PC,
Hemerly AS

EMBO Journal
  27 (20): 2746–2756; Oct 22 2008  
[Abstract]
[DOI] [Full Text] [PDF]

Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1
Gutiérrez RA,
Stokes TL,
Thum K,
Xu X,
Obertello M,
Katari MS,
Tanurdzic M,
Dean A,
Nero DC,
McClung CR,
Coruzzi GM

Proc Natl Acad Sci U S A
  105 (12): 4939-4944; Mar 2008   PMCID: PMC2290744
[Abstract]
[DOI] [Full Text] [PDF]

Epigenetic inheritance and reprogramming in plants and fission yeast
Martienssen RA,
Kloc A,
Slotkin RK,
Tanurdzic M

Cold Spring Harbor symposia on quantitative biology
  73 (0): 265-71; 2008  
[Abstract]
[DOI] [Full Text]

Epigenetic natural variation in Arabidopsis thaliana
Vaughn MW,
Tanurdzic M,
Lippman Z,
Jiang H,
Carrasquillo R,
Rabinowicz PD,
Dedhia N,
McCombie WR,
Agier N,
Bulski A,
Colot V,
Doerge RW,
Martienssen RA

PLoS biology
  5 (7): e174; Jul 2007  
[Abstract]
[DOI] [Full Text]

Silent running: RNA interference and heterochromatic modification
Martienssen R,
Zaratiegui M,
Irvine D,
Goto D,
Slotkin K,
Tanurdzic M,
Lippman Z,
Vaughn M,
May B,
Cande Z,
Colot V,
Doerge RW

Chromosome Research
  15 (0): 20-21; 2007  
[Full Text]

Replication, repair, and reactivation
Vaughn MW,
Tanurdzic M,
Martienssen R

Developmental cell
  9 (6): 724-5; Dec 2005  
[Abstract]
[DOI] [Full Text]


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