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9 Article(s) on File
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The contribution of de novo coding mutations to autism spectrum disorder
Iossifov I,
ORoak BJ,
Sanders SJ,
Ronemus M,
Krumm N,
Levy D,
Stessman HA,
Witherspoon KT,
Vives L,
Patterson KE,
Smith JD,
Paeper B,
Nickerson DA,
Dea J,
Dong S,
Gonzalez LE,
Mandell JD,
Mane SM,
Murtha MT,
Sullivan CA,
Walker MF,
Waqar Z,
Wei L,
Willsey AJ,
Yamrom B,
Lee YH,
Grabowska E,
Dalkic E,
Wang Z,
Marks S,
Andrews P,
Leotta A,
Kendall J,
Hakker I,
Rosenbaum J,
Ma B,
Rodgers L,
Troge J,
Narzisi G,
Yoon S,
Schatz MC,
Ye K,
McCombie WR,
Shendure J,
Eichler EE,
State MW,
Wigler M

Nature
  515 (7526): 2160-U136; Nov 13 2014   NLM
[Abstract]
[DOI] [Full Text]

Accurate de novo and transmitted indel detection in exome-capture data using microassembly
Narzisi G,
ORawe JA,
Iossifov I,
Fang H,
Lee Yh,
Wang Z,
Wu Y,
Lyon GJ,
Wigler M,
Schatz MC

Nature Methods
  11 (10): 1033-1036; Oct 2014   NLM
[Abstract]
[DOI] [Full Text]

On algorithmic complexity of biomolecular sequence assembly problem
Narzisi G,
Mishra B,
Schatz MC
In:
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
(ed. ) : ; 2014. 8542 : 183-195   Elsevier
[Abstract]
[DOI] [Full Text]

Reducing INDEL calling errors in whole genome and exome sequencing data
Fang H,
Wu Y,
Narzisi G,
ORawe JA,
Barron LT,
Rosenbaum J,
Ronemus M,
Iossifov I,
Schatz MC,
Lyon GJ

Genome Med
  6 (10): 89; 2014   Nlm
[Abstract]
[DOI] [Full Text]

Hawkeye and AMOS: Visualizing and assessing the quality of genome assemblies
Schatz MC,
Phillippy AM,
Sommer DD,
Delcher AL,
Puiu D,
Narzisi G,
Salzberg SL,
Pop M

Briefings in Bioinformatics
  14 (2): 213-224; Mar 2013  
[DOI] [Full Text]

Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
Ming R,
VanBuren R,
Liu YL,
Yang M,
Han YP,
Li LT,
Zhang Q,
Kim MJ,
Schatz MC,
Campbell M,
Li JP,
Bowers JE,
Tang HB,
Lyons E,
Ferguson AA,
Narzisi G,
Nelson DR,
Blaby-Haas CE,
Gschwend AR,
Jiao YN,
Der JP,
Zeng FC,
Han J,
Min XJ,
Hudson KA,
Singh R,
Grennan AK,
Karpowicz SJ,
Watling JR,
Ito K,
Robinson SA,
Hudson ME,
Yu QY,
Mockler TC,
Carroll A,
Zheng Y,
Sunkar R,
Jia RZ,
Chen N,
Arro J,
Wai CM,
Wafula E,
Spence A,
Han YN,
Xu LM,
Zhang JS,
Peery R,
Haus MJ,
Xiong WW,
Walsh JA,
Wu J,
Wang ML,
Zhu YJ,
Paull RE,
Britt AB,
Du CG,
Downie SR,
Schuler MA,
Michael TP,
Long SP,
Ort DR,
Schopf JW,
Gang DR,
Jiang N,
Yandell M,
dePamphilis CW,
Merchant SS,
Paterson AH,
Buchanan BB,
Li SH,
Shen-Miller J

Genome Biology
  14 (5): 2013  
[Abstract]
[DOI] [Full Text]

Reevaluating Assembly Evaluations with Feature Response Curves: GAGE and Assemblathons
Vezzi F,
Narzisi G,
Mishra B

PLoS ONE
  7 (12): Article no. e52210; Dec 18 2012  
[Abstract]
[Full Text]

De novo gene disruptions in children on the autistic spectrum
Iossifov I,
Ronemus M,
Levy D,
Wang Z,
Hakker I,
Rosenbaum J,
Yamrom B,
Lee YH,
Narzisi G,
Leotta A,
Kendall J,
Grabowska E,
Ma B,
Marks S,
Rodgers L,
Stepansky A,
Troge J,
Andrews P,
Bekritsky M,
Pradhan K,
Ghiban E,
Kramer M,
Parla J,
Demeter R,
Fulton LL,
Fulton RS,
Magrini VJ,
Ye K,
Darnell JC,
Darnell RB,
Mardis ER,
Wilson RK,
Schatz MC,
McCombie WR,
Wigler M

Neuron
  74 (2): 285-99; Apr 26 2012   Nlm
[Abstract]
[DOI] [Full Text]

TotalReCaller: improved accuracy and performance via integrated alignment and base-calling
Menges F,
Narzisi G,
Mishra B

Bioinformatics
  27 (17): 2330-2337; Sep 1 2011   ISI Web of Science
[Abstract]
[DOI]


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