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20 Article(s) on File
Page 1 of 1
The contribution of de novo coding mutations to autism spectrum disorder
Iossifov I,
ORoak BJ,
Sanders SJ,
Ronemus M,
Krumm N,
Levy D,
Stessman HA,
Witherspoon KT,
Vives L,
Patterson KE,
Smith JD,
Paeper B,
Nickerson DA,
Dea J,
Dong S,
Gonzalez LE,
Mandell JD,
Mane SM,
Murtha MT,
Sullivan CA,
Walker MF,
Waqar Z,
Wei L,
Willsey AJ,
Yamrom B,
Lee YH,
Grabowska E,
Dalkic E,
Wang Z,
Marks S,
Andrews P,
Leotta A,
Kendall J,
Hakker I,
Rosenbaum J,
Ma B,
Rodgers L,
Troge J,
Narzisi G,
Yoon S,
Schatz MC,
Ye K,
McCombie WR,
Shendure J,
Eichler EE,
State MW,
Wigler M

Nature
  515 (7526): 2160-U136; Nov 13 2014   NLM
[Abstract]
[DOI] [Full Text]

Facilitated sequence counting and assembly by template mutagenesis
Levy D,
Wigler M

Proceedings of the National Academy of Sciences of the United States of America
  111 (43): E4632-E4637; Oct 13 2014   Nlm
[Abstract]
[DOI] [Full Text]

The role of de novo mutations in the genetics of autism spectrum disorders
Ronemus M,
Iossifov I,
Levy D,
Wigler M

Nature Reviews Genetics
  15 (2): 133-141; 2014  
[Abstract]
[DOI] [Full Text]

The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA
Regulski M,
Lu Z,
Kendall J,
Donoghue MT,
Reinders J,
Llaca V,
Deschamps S,
Smith A,
Levy D,
McCombie WR,
Tingey S,
Rafalski A,
Hicks J,
Ware D,
Martienssen R

Genome Res
  (0): Jun 5 2013   NLM
[Abstract]
[DOI] [Full Text]

Rare De Novo Germline Copy-Number Variation in Testicular Cancer
Stadler ZK,
Esposito D,
Shah S,
Vijai J,
Yamrom B,
Levy D,
Lee YH,
Kendall J,
Leotta A,
Ronemus M,
Hansen N,
Sarrel K,
Rau-Murthy R,
Schrader K,
Kauff N,
Klein R,
Lipkin S,
Murali R,
Robson M,
Sheinfeld J,
Feldman D,
Bosl G,
Norton L,
Wigler M,
Offit K

The American Journal of Human Genetics
  91 (2): 379-383; Aug 10 2012  
[Abstract]
[DOI] [Full Text]

De novo gene disruptions in children on the autistic spectrum
Iossifov I,
Ronemus M,
Levy D,
Wang Z,
Hakker I,
Rosenbaum J,
Yamrom B,
Lee YH,
Narzisi G,
Leotta A,
Kendall J,
Grabowska E,
Ma B,
Marks S,
Rodgers L,
Stepansky A,
Troge J,
Andrews P,
Bekritsky M,
Pradhan K,
Ghiban E,
Kramer M,
Parla J,
Demeter R,
Fulton LL,
Fulton RS,
Magrini VJ,
Ye K,
Darnell JC,
Darnell RB,
Mardis ER,
Wilson RK,
Schatz MC,
McCombie WR,
Wigler M

Neuron
  74 (2): 285-99; Apr 26 2012   Nlm
[Abstract]
[DOI] [Full Text]

Reducing system noise in copy number data using principal components of self-self hybridizations
Lee YH,
Ronemus M,
Kendall J,
Lakshmi B,
Leotta A,
Levy D,
Esposito D,
Grubor V,
Ye K,
Wigler M,
Yamrom B

Proceedings of the National Academy of Sciences of the United States of America
  109 (3): E103-E110; Jan 2012  
[Abstract]
[DOI] [Full Text]

Rare De Novo and Transmitted Copy-Number Variation in Autistic Spectrum Disorders
Levy D,
Ronemus M,
Yamrom B,
Lee YH,
Leotta A,
Kendall JT,
Marks S,
Lakshmi B,
Pai D,
Ye K,
Buja A,
Krieger A,
Yoon S,
Troge JE,
Rodgers ,
Iossifov I,
Wigler MH

Neuron
  70 (5): 886-897; Jun 8 2011  
[Abstract]
[DOI]

Rare De Novo Variants Associated with Autism Implicate a Large Functional Network of Genes Involved in Formation and Function of Synapses
Gilman S,
Iossifov I,
Levy D,
Ronemus M,
Wigler MH,
Vitkup D

Neuron
  70 (5): 898-907; Jun 8 2011  
[Abstract]
[DOI]

Duplications of the neuropeptide receptor gene VIPR2 confer significant risk for schizophrenia
Vacic V,
McCarthy SE,
Malhotra D,
Murray F,
Chou HH,
Peoples A,
Makarov V,
Yoon S,
Bhandari A,
Corominas R,
Iakoucheva LM,
Krastoshevsky O,
Krause V,
Larach-Walters V,
Welsh DK,
Craig D,
Kelsoe JR,
Gershon ES,
Leal SM,
Aquila MD,
Morris DW,
Gill M,
Corvin A,
Insel PA,
McClellan J,
King MC,
Karayiorgou M,
Levy DL,
Delisi LE,
Sebat J

Nature
  (0): Feb 23 2011   NLM
[Abstract]
[DOI]

DNA methylation patterns in luminal breast cancers differ from non-luminal subtypes and can identify relapse risk independent of other clinical variables
Kamalakaran S,
Varadan V,
Giercksky Russnes HE,
Levy D,
Kendall JT,
Janevski A,
Riggs M,
Banerjee N,
Synnestvedt M,
Schlichting E,
KÃ¥resen R,
Shama Prasada K,
Rotti H,
Rao R,
Rao L,
Eric Tang MH,
Satyamoorthy K,
Lucito R,
Wigler MH,
Dimitrova N,
Naume B,
Borresen-Dale AL,
Hicks JB

Molecular Oncology
  5 (1): 77-92; Feb 2011  
[Abstract]
[DOI] [Full Text] [PDF]

Tumour evolution inferred by single-cell sequencing
Navin NE,
Kendall JT,
Troge JE,
Andrews P,
Rodgers ,
McIndoo J,
Cook K,
Stepansky ,
Levy D,
Esposito D,
Muthuswamy L,
Krasnitz A,
McCombie WR,
Hicks JB,
Wigler MH

Nature
  (0): 2011   Elsevier
[Abstract]
[DOI] [Full Text]

High frequencies of de novo cnvs in bipolar disorder and schizophrenia
Malhotra D,
McCarthy S,
Michaelson JJ,
Vacic V,
Burdick KE,
Yoon S,
Cichon S,
Corvin A,
Gary S,
Gershon ES,
Gill M,
Karayiorgou M,
Kelsoe JR,
Krastoshevsky O,
Krause V,
Leibenluft E,
Levy DL,
Makarov V,
Bhandari A,
Malhotra AK,
McMahon FJ,
Nöthen MM,
Potash JB,
Rietschel M,
Schulze TG,
Sebat J

Neuron
  72 (6): 951-963; 2011  
[Abstract]
[DOI] [Full Text]

Tracing Tumor Lineage and Progression through Genomic Copy Number Profiling at the Single Cell Level
Hicks JB,
Navin NE,
Kendall JT,
Levy D,
Wigler MH

Annals of Oncology
  21 (0): 96O; May 2010  
[Full Text]

A recurrent 16p12.1 microdeletion supports a two-hit model for severe developmental delay
Girirajan S,
Rosenfeld JA,
Cooper GM,
Antonacci F,
Siswara P,
Itsara A,
Vives L,
Walsh T,
McCarthy SE,
Baker C,
Mefford HC,
Kidd JM,
Browning SR,
Browning BL,
Dickel DE,
Levy DL,
Ballif BC,
Platky K,
Farber DM,
Gowans GC,
Wetherbee JJ,
Asamoah A,
Weaver DD,
Mark PR,
Dickerson J,
Garg BP,
Ellingwood SA,
Smith R,
Banks VC,
Smith W,
McDonald MT,
Hoo JJ,
French BN,
Hudson C,
Johnson JP,
Ozmore JR,
Moeschler JB,
Surti U,
Escobar LF,
El-Khechen D,
Gorski JL,
Kussmann J,
Salbert B,
Lacassie Y,
Biser A,
McDonald-McGinn DM,
Zackai EH,
Deardorff MA,
Shaikh TH,
Haan E,
Friend KL,
Fichera M,
Romano C,
Gécz J,
DeLisi LE,
Sebat J,
King MC,
Shaffer LG,
Eichler EE

Nature Genetics
  (0): Feb 14 2010   PMCID: PMC2847896
[Abstract]
[DOI] [Full Text] [PDF]

Inferring tumor progression from genomic heterogeneity
Navin NE,
Krasnitz A,
Rodgers L,
Cook K,
Meth JL,
Kendall JT,
Riggs M,
Eberling Y,
Troge JE,
Grubor V,
Levy D,
Lundin P,
Månér S,
Zetterberg A,
Hicks JB,
Wigler MH

Genome Research
  20 (1): 68-80; Jan 2010   PMCID: PMC2798832
[Abstract]
[DOI] [Full Text] [PDF]

Microduplications of 16p11.2 are associated with schizophrenia
McCarthy SE,
Makarov V,
Kirov G,
Addington AM,
McClellan J,
Yoon S,
Perkins DO,
Dickel DE,
Kusenda M,
Krastoshevsky O,
Krause V,
Kumar RA,
Grozeva D,
Malhotra D,
Walsh T,
Zackai EH,
Kaplan P,
Ganesh J,
Krantz ID,
Spinner NB,
Roccanova P,
Bhandari A,
Pavon K,
Lakshmi B,
Leotta A,
Kendall JT,
Lee YH,
Vacic V,
Gary S,
Iakoucheva LM,
Crow TJ,
Christian SL,
Lieberman JA,
Stroup TS,
Lehtimaki T,
Puura K,
Haldeman-Englert C,
Pearl J,
Goodell M,
Willour VL,
DeRosse P,
Steele J,
Kassem L,
Wolff J,
Chitkara N,
McMahon FJ,
Malhotra AK,
Potash JB,
Schulze TG,
Nothen MM,
Cichon S,
Rietschel M,
Leibenluft E,
Kustanovich V,
Lajonchere CM,
Sutcliffe JS,
Skuse D,
Gill M,
Gallagher L,
Mendell NR,
Craddock N,
Owen MJ,
ODonovan MC,
Shaikh TH,
Susser E,
DeLisi LE,
Sullivan PF,
Deutsch CK,
Rapoport J,
Levy DL,
King MC,
Sebat J

Nature Genetics
  41 (11): 1223-1227; Nov 2009   PMCID: PMC2951180
[Abstract]
[DOI] [Full Text] [PDF]

Rare structural variants in schizophrenia: one disorder, multiple mutations; one mutation, multiple disorders
Sebat J,
Levy DL,
McCarthy SE

Trends Genet
  (0): Oct 31 2009  
[Abstract]
[DOI] [Full Text] [PDF]

Rare Gene Copy Number Variations Are Associated with Specific Endophenotypes in Schizophrenia
Deutsch CK,
Malhotra D,
Krause V,
McCarthy SE,
Krastoshevsky O,
Coleman M,
Francis RW,
Bodkin JA,
Boling L,
Cole J,
Gibbs A,
Johnson F,
Lerbinger J,
Mendell NR,
Sebat J,
Levy DL

Schizophrenia Bulletin
  35 (0): 117-117; Mar 2009  


The somatic replication of DNA methylation
Wigler MH,
Levy D,
Perucho M

Cell
  24 (1): 33-40; 1981  
[Abstract]
[DOI] [Full Text]


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