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8 Article(s) on File
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Regulatory modules controlling maize inflorescence architecture
Eveland AL,
Goldshmidt A,
Pautler M,
Morohashi K,
Liseron-Monfils C,
Lewis MW,
Kumari S,
Hiraga S,
Yang F,
Unger-Wallace E,
Olson A,
Hake S,
Vollbrecht E,
Grotewold E,
Ware D,
Jackson D

Genome Research
  24 (3): 431-443; 2014   Nlm
[Abstract]
[DOI] [Full Text]

Gramene 2013: comparative plant genomics resources
Monaco MK,
Stein J,
Naithani S,
Wei S,
Dharmawardhana P,
Kumari S,
Amarasinghe V,
Youens-Clark K,
Thomason J,
Preece J,
Pasternak S,
Olson A,
Jiao Y,
Lu Z,
Bolser D,
Kerhornou A,
Staines D,
Walts B,
Wu G,
DEustachio P,
Haw R,
Croft D,
Kersey PJ,
Stein L,
Jaiswal P,
Ware D

Nucleic Acids Research
  42 (0): D1193-9; Jan 2014   NLM
[Abstract]
[DOI] [Full Text]

Genome-Wide Computational Prediction and Analysis of Core Promoter Elements across Plant Monocots and Dicots
Kumari S,
Ware D

PLoS ONE
  8 (10): Art no. e79011; Oct 29 2013   NLM
[Abstract]
[DOI] [Full Text]

Comparative network analysis of gene co-expression networks reveals the conserved and species-specific functions of cell-wall related genes between arabidopsis and poplar
Wang D,
Pan E,
Fang G,
Kumari S,
He F,
Ware D,
Maslov S,
Gerstein M

2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013
  689-690; Sep 22-Sep 25 2013   Elsevier
[Abstract]
[DOI] [Full Text]

Characterization of miRNAs in Response to Short-Term Waterlogging in Three Inbred Lines of Zea mays
Liu ZJ,
Kumari S,
Zhang LF,
Zheng YL,
Ware D

PLoS ONE
  7 (6): e39786; Jun 29 2012  
[Abstract]
[DOI] [Full Text]

Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
Swanson-Wagner RA,
Eichten SR,
Kumari S,
Tiffin P,
Stein JC,
Ware DH,
Springer NM

Genome Research
  20 (12): 1689-1699; Dec 2010   PMCID: PMC2989995
[Abstract]
[DOI]

The B73 Maize Genome: Complexity, Diversity, and Dynamics
Schnable PS,
Ware DH,
Fulton RS,
Stein JC,
Wei FS,
Pasternak S,
Liang CZ,
Zhang JW,
Fulton L,
Graves TA,
Minx P,
Reily AD,
Courtney L,
Kruchowski SS,
Tomlinson C,
Strong C,
Delehaunty K,
Fronick C,
Courtney B,
Rock SM,
Belter E,
Du FY,
Kim K,
Abbott RM,
Cotton M,
Levy A,
Marchetto P,
Ochoa K,
Jackson SM,
Gillam B,
Chen WZ,
Yan L,
Higginbotham J,
Cardenas M,
Waligorski J,
Applebaum E,
Phelps L,
Falcone J,
Kanchi K,
Thane T,
Scimone A,
Thane N,
Henke J,
Wang T,
Ruppert J,
Shah N,
Rotter K,
Hodges J,
Ingenthron E,
Cordes M,
Kohlberg S,
Sgro J,
Delgado B,
Mead K,
Chinwalla A,
Leonard S,
Crouse K,
Collura K,
Kudrna D,
Currie J,
He RF,
Angelova A,
Rajasekar S,
Mueller T,
Lomeli R,
Scara G,
Ko A,
Delaney K,
Wissotski M,
Lopez G,
Campos D,
Braidotti M,
Ashley E,
Golser W,
Kim H,
Lee S,
Lin JK,
Dujmic Z,
Kim W,
Talag J,
Zuccolo A,
Fan C,
Sebastian A,
Kramer MR,
Spiegel L,
Nascimento L,
Zutavern T,
Miller B,
Ambroise C,
Muller S,
Spooner W,
Narechania A,
Ren LY,
Wei S,
Kumari S,
Faga BP,
Levy MJ,
McMahan L,
Van Buren P,
Vaughn MW,
Ying K,
Yeh CT,
Emrich SJ,
Jia Y,
Kalyanaraman A,
Hsia AP,
Barbazuk WB,
Baucom RS,
Brutnell TP,
Carpita NC,
Chaparro C,
Chia JM,
Deragon JM,
Estill JC,
Fu Y,
Jeddeloh JA,
Han YJ,
Lee H,
Li PH,
Lisch DR,
Liu SZ,
Liu ZJ,
Nagel DH,
McCann MC,
SanMiguel P,
Myers AM,
Nettleton D,
Nguyen J,
Penning BW,
Ponnala L,
Schneider KL,
Schwartz DC,
Sharma A,
Soderlund C,
Springer NM,
Sun Q,
Wang H,
Waterman M,
Westerman R,
Wolfgruber TK,
Yang LX,
Yu Y,
Zhang LF,
Zhou SG,
Zhu Q,
Bennetzen JL,
Dawe RK,
Jiang JM,
Jiang N,
Presting GG,
Wessler SR,
Aluru S,
Martienssen RA,
Clifton SW,
McCombie WR,
Wing RA,
Wilson RK

Science
  326 (5956): 1112-1115; Nov 20 2009  
[Abstract]
[DOI] [Full Text] [PDF]

A Genome-Wide Characterization of MicroRNA Genes in Maize
Zhang L,
Chia JM,
Kumari S,
Stein JC,
Liu Z,
Narechania A,
Maher CA,
Guill K,
McMullen MD,
Ware DH

PLoS Genet
  5 (11): e1000716; Nov 2009   PMCID:PMC2773440
[Abstract]
[DOI] [Full Text] [PDF]


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