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34 Article(s) on File
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A single molecule scaffold for the maize genome
Zhou S,
Wei F,
Nguyen J,
Bechner M,
Potamousis K,
Goldstein S,
Pape L,
Mehan MR,
Churas C,
Pasternak S,
Forrest DK,
Wise R,
Ware DH,
Wing RA,
Waterman MS,
Livny M,
Schwartz DC

PLoS Genet
  5 (11): e1000711; Nov 2009   PMCID: PMC2774507
[Abstract]
[DOI] [Full Text] [PDF]

Genome analysis of the platypus reveals unique signatures of evolution
Warren WC,
Hillier LW,
Marshall Graves JA,
Birney E,
Ponting CP,
Grutzner F,
Belov K,
Miller W,
Clarke L,
Chinwalla AT,
Yang SP,
Heger A,
Locke DP,
Miethke P,
Waters PD,
Veyrunes F,
Fulton L,
Fulton B,
Graves T,
Wallis J,
Puente XS,
Lopez-Otin C,
Ordonez GR,
Eichler EE,
Chen L,
Cheng Z,
Deakin JE,
Alsop A,
Thompson K,
Kirby P,
Papenfuss AT,
Wakefield MJ,
Olender T,
Lancet D,
Huttley GA,
Smit AF,
Pask A,
Temple-Smith P,
Batzer MA,
Walker JA,
Konkel MK,
Harris RS,
Whittington CM,
Wong ES,
Gemmell NJ,
Buschiazzo E,
Vargas Jentzsch IM,
Merkel A,
Schmitz J,
Zemann A,
Churakov G,
Kriegs JO,
Brosius J,
Murchison EP,
Sachidanandam R,
Smith C,
Hannon GJ,
Tsend-Ayush E,
McMillan D,
Attenborough R,
Rens W,
Ferguson-Smith M,
Lefevre CM,
Sharp JA,
Nicholas KR,
Ray DA,
Kube M,
Reinhardt R,
Pringle TH,
Taylor J,
Jones RC,
Nixon B,
Dacheux JL,
Niwa H,
Sekita Y,
Huang X,
Stark A,
Kheradpour P,
Kellis M,
Flicek P,
Chen Y,
Webber C,
Hardison R,
Nelson J,
Hallsworth-Pepin K,
Delehaunty K,
Markovic C,
Minx P,
Feng Y,
Kremitzki C,
Mitreva M,
Glasscock J,
Wylie T,
Wohldmann P,
Thiru P,
Nhan MN,
Pohl CS,
Smith SM,
Hou S,
Renfree MB,
Mardis ER,
Wilson RK

Nature
  453 (7192): 175-83; May 8 2008   PMC2803040
[Abstract]
[DOI] [Full Text] [PDF]

WormBase 2007
Rogers A,
Antoshechkin I,
Bieri T,
Blasiar D,
Bastiani C,
Canaran P,
Chan J,
Chen WJ,
Davis P,
Fernandes J,
Fiedler TJ,
Han M,
Harris T,
Kishore R,
Lee R,
McKay SJ,
Muller HM,
Nakamura C,
Ozersky P,
Petcherski A,
Schindelman G,
Schwarz EM,
Spooner W,
Tuli MA,
Auken KV,
Wang D,
Wang X,
Williams G,
Yook K,
Durbin R,
Stein LD,
Spieth J,
Sternberg PW

Nucl. Acids Res.
  36 (0): D612-7; Jan 2008   PMCID: PMC2238927
[Abstract]
[DOI] [Full Text] [PDF]

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
Stark A,
Lin MF,
Kheradpour P,
Pedersen JS,
Parts L,
Carlson JW,
Crosby MA,
Rasmussen MD,
Roy S,
Deoras AN,
Ruby JG,
Brennecke J,
Hodges E,
Hinrichs AS,
Caspi A,
Paten B,
Park SW,
Han MV,
Maeder ML,
Polansky BJ,
Robson BE,
Aerts S,
van Helden J,
Hassan B,
Gilbert DG,
Eastman DA,
Rice M,
Weir M,
Hahn MW,
Park Y,
Dewey CN,
Pachter L,
Kent WJ,
Haussler D,
Lai EC,
Bartel DP,
Hannon GJ,
Kaufman TC,
Eisen MB,
Clark AG,
Smith D,
Celniker SE,
Gelbart WM,
Kellis M

Nature
  450 (7167): 219-232; Nov 2007  
[Abstract]
[DOI] [Full Text] [PDF]

WormBook: the online review of Caenorhabditis elegans biology
Girard LR,
Fiedler TJ,
Harris TW,
Carvalho F,
Antoshechkin I,
Han M,
Sternberg PW,
Stein LD,
Chalfie M

Nucleic Acids Res
  35 (0): D472-D475; Jan 2007   PMCID: PMC1669767
[Abstract]
[DOI] [Full Text] [PDF]

WormBase: new content and better access
Bieri T,
Blasiar D,
Ozersky P,
Antoshechkin I,
Bastiani C,
Canaran P,
Chan J,
Chen N,
Chen WJ,
Davis P,
Fiedler TJ,
Girard LR,
Han M,
Harris TW,
Kishore R,
Lee R,
McKay SJ,
Müller HM,
Nakamura C,
Petcherski A,
Rangarajan A,
Rogers A,
Schindelman G,
Schwarz EM,
Spooner W,
Tuli MA,
Van Auken K,
Wang D,
Wang X,
Williams G,
Durbin R,
Stein LD,
Sternberg PW,
Spieth J

Nucleic Acids Res
  35 (0): D506-D510; Jan 2007   PMCID: PMC1669750
[Abstract]
[DOI] [Full Text] [PDF]

Initial sequencing and comparative analysis of the mouse genome
Waterston RH,
Lindblad-Toh K,
Birney E,
Rogers J,
Abril JF,
Agarwal P,
Agarwala R,
Ainscough R,
Alexandersson M,
An P,
Antonarakis SE,
Attwood J,
Baertsch R,
Bailey J,
Barlow K,
Beck S,
Berry E,
Birren B,
Bloom T,
Bork P,
Botcherby M,
Bray N,
Brent MR,
Brown DG,
Brown SD,
Bult C,
Burton J,
Butler J,
Campbell RD,
Carninci P,
Cawley S,
Chiaromonte F,
Chinwalla AT,
Church DM,
Clamp M,
Clee C,
Collins FS,
Cook LL,
Copley RR,
Coulson A,
Couronne O,
Cuff J,
Curwen V,
Cutts T,
Daly M,
David R,
Davies J,
Delehaunty KD,
Deri J,
Dermitzakis ET,
Dewey C,
Dickens NJ,
Diekhans M,
Dodge S,
Dubchak I,
Dunn DM,
Eddy SR,
Elnitski L,
Emes RD,
Eswara P,
Eyras E,
Felsenfeld A,
Fewell GA,
Flicek P,
Foley K,
Frankel WN,
Fulton LA,
Fulton RS,
Furey TS,
Gage D,
Gibbs RA,
Glusman G,
Gnerre S,
Goldman N,
Goodstadt L,
Grafham D,
Graves TA,
Green ED,
Gregory S,
Guigo R,
Guyer M,
Hardison RC,
Haussler D,
Hayashizaki Y,
Hillier LW,
Hinrichs A,
Hlavina W,
Holzer T,
Hsu F,
Hua A,
Hubbard T,
Hunt A,
Jackson I,
Jaffe DB,
Johnson LS,
Jones M,
Jones TA,
Joy A,
Kamal M,
Karlsson EK,
Karolchik D,
Kasprzyk A,
Kawai J,
Keibler E,
Kells C,
Kent WJ,
Kirby A,
Kolbe DL,
Korf I,
Kucherlapati RS,
Kulbokas EJ,
Kulp D,
Landers T,
Leger JP,
Leonard S,
Letunic I,
Levine R,
Li J,
Li M,
Lloyd C,
Lucas S,
Ma B,
Maglott DR,
Mardis ER,
Matthews L,
Mauceli E,
Mayer JH,
McCarthy M,
McCombie WR,
McLaren S,
McLay K,
McPherson JD,
Meldrim J,
Meredith B,
Mesirov JP,
Miller W,
Miner TL,
Mongin E,
Montgomery KT,
Morgan M,
Mott R,
Mullikin JC,
Muzny DM,
Nash WE,
Nelson JO,
Nhan MN,
Nicol R,
Ning Z,
Nusbaum C,
OConnor MJ,
Okazaki Y,
Oliver K,
Larty EO,
Pachter L,
Parra G,
Pepin KH,
Peterson J,
Pevzner P,
Plumb R,
Pohl CS,
Poliakov A,
Ponce TC,
Ponting CP,
Potter S,
Quail M,
Reymond A,
Roe BA,
Roskin KM,
Rubin EM,
Rust AG,
Santos R,
Sapojnikov V,
Schultz B,
Schultz J,
Schwartz MS,
Schwartz S,
Scott C,
Seaman S,
Searle S,
Sharpe T,
Sheridan A,
Shownkeen R,
Sims S,
Singer JB,
Slater G,
Smit A,
Smith DR,
Spencer B,
Stabenau A,
Strange-Thomann NS,
Sugnet C,
Suyama M,
Tesler G,
Thompson J,
Torrents D,
Trevaskis E,
Tromp J,
Ucla C,
Vidal AU,
Vinson JP,
von Niederhausern AC,
Wade CM,
Wall M,
Weber RJ,
Weiss RB,
Wendl MC,
West AP,
Wetterstrand K,
Wheeler R,
Whelan S,
Wierzbowski J,
Willey D,
Williams S,
Wilson RK,
Winter E,
Worley KC,
Wyman D,
Yang S,
Yang SP,
Zdobnov EM,
Zody MC,
Lander ES

Nature
  420 (6915): 520-562; Dec 2002  
[Full Text]

Assembly of nucleosomes: do multiple assembly factors mean multiple mechanisms?
Kaufman PD,
Botchan MR

Curr Opin Genet Dev
  4 (2): 229-35; Apr 1994  
[Abstract]
[DOI] [Full Text]

Crystal Structures of the Iron Protein and Molybdenum-Iron Protein of Nitrogenase
Rees DC,
Kim J,
Georgiadis MM,
Komiya H,
Chirino AJ,
Woo D,
Schlessman J,
Chan MK,
Joshua-Tor L,
Santillan G,
Chakrabarti P,
Hsu BT
In:
Molybdenum Enzymes, Cofactors, and Model Systems
(eds. Stiefl, E. I. Coucouvanis, D Newton, W. E.) : American Chemical So; 1993. 535: 170-185  
[DOI] [Full Text]

A Deletion in the Simian Virus-40 Large T-Antigen Impairs Lytic Replication in Monkey Cells Invivo but Enhances DNA-Replication Invitro - New Complementation Function of T-Antigen
Maulbecker C,
Mohr I,
Gluzman Y,
Bartholomew J,
Botchan M

Journal of Virology
  66 (4): 2195-2207; Apr 1992  
[Abstract]
[Full Text]

Characteristics of an Sv40-Plasmid Recombinant and Its Movement into and out of the Genome of a Murine Cell
Hanahan D,
Lane D,
Lipsich L,
Wigler MH,
Botchan M

Cell
  21 (1): 127-139; Aug 1980  
[DOI] [Full Text]

Integration and Excision of Sv40 DNA from the Chromosome of a Transformed-Cell
Botchan M,
Stringer J,
Mitchison T,
Sambrook J

Cell
  20 (1): 143-152; May 1980  
[Abstract]
[DOI] [Full Text]

DNA Mediated Gene Transfer: Theory and Application
Wigler MH,
Perucho M,
Lipsich L,
Lane D,
Klessig D,
Grodzicker T,
Botchan M,
Hanahan D

Journal of Supramolecular Structure
  9 (0): 229; 1980  


The Organization and Expression of Viral Sequences Integrated in Cells Transformed by Adenovirus 2 and Sv-40
Sambrook JF,
Botchan M,
Hu SL,
Stringer J

Journal of Supramolecular Structure
  9 (0): 223; 1980  


Integration of Viral-DNA Sequences in Cells Transformed by Adenovirus 2 or Sv40
Sambrook J,
Botchan M,
Hu SL,
Mitchison T,
Stringer J

Proceedings of the Royal Society of London Series B-Biological Sciences
  210 (1180): 423-435; 1980  
[Full Text]

Analysis of the Sites of Integration of Viral-DNA Sequences in Rat-Cells Transformed by Adenovirus-2 or Sv40
Sambrook J,
Greene R,
Stringer J,
Mitchison T,
Hu SL,
Botchan M

Cold Spring Harbor Symposia on Quantitative Biology
  44 (0): 569-584; 1979  
[Full Text]

Retransformation of a Simian Virus-40 Revertant Cell-Line, Which Is Resistant to Viral and DNA Infections, by Micro-Injection of Viral-DNA
Graessmann A,
Graessmann M,
Topp WC,
Botchan M

Journal of Virology
  32 (3): 989-994; 1979  
[Full Text]

Sv-40 Excision from Chromosomes
Botchan M,
Topp W,
Sambrook J

Cold Spring Harbor Symposia on Quantitative Biology
  (0): P95-96; 1979  


Another chromosomal assignment for a simian virus 40 integration site in human cells
Kucherlapati R,
Hwang SP,
Shimizu N,
McDougall JK,
Botchan MR

Proc Natl Acad Sci U S A
  75 (9): 4460-4; Sep 1978  
[Abstract]
[Full Text]

Isolation and Characterization of T-Antigen - Negative Revertants from a Line of Transformed Rat Cells Containing One Copy of Sv40 Genome
Steinberg B,
Pollack R,
Topp W,
Botchan M

Cell
  13 (1): 19-32; 1978  
[Full Text]

Studies on Simian Virus-40 Excision from Cellular Chromosomes
Botchan M,
Topp W,
Sambrook J

Cold Spring Harbor Symposia on Quantitative Biology XLIII: DNA : replication and recombination
  43 709-719; 1978  


Sv40 as a Vector
Sambrook J,
Topp W,
Botchan M

Journal of Supramolecular Structure
  (0): 49-49; 1977  
[Full Text]

Ends of bacteriophage mu DNA
Bukhari AI,
Froshauer S,
Botchan M

Nature
  264 (5586): 580-3; Dec 9 1976  
[Full Text]

The arrangement of simian virus 40 sequences in the DNA of transformed cells
Botchan M,
Topp W,
Sambrook J

Cell
  9 (2): 269-87; Oct 1976  
[Abstract]
[Full Text]

Arrangement of Simian-Virus 40 Sequences in DNA of Transformed-Cells
Botchan M,
Topp W,
Sambrook J

Cell
  9 (2): 269-287; 1976  
[Full Text]

Viral DNA sequences in cells transformed by simian virus 40, adenovirus type 2 and adenovirus type 5
Sambrook J,
Botchan M,
Gallimore P,
Ozanne B,
Pettersson U,
Williams J,
Sharp PA

Cold Spring Harb Symp Quant Biol
  39 Pt (0): 615-32; 1975  
[Full Text]

Characterization of SV40 DNA rescued from transformed mouse cells
Botchan M,
Ozanne B,
Sambrook J

Cold Spring Harb Symp Quant Biol
  39 Pt (0): 95-9; 1975  
[Full Text]

Viral DNA in transformed cells. III. The amounts of different regions of the SV40 genome present in a line of transformed mouse cells
Botchan M,
Ozanne B,
Sugden B,
Sharp PA,
Sambrook J

Proc Natl Acad Sci U S A
  71 (10): 4183-7; Oct 1974  
[Full Text]

Viral DNA Sequences in Cells Transformed by Simian Virus 40, Adenovirus Type 2 and Adenovirus Type 5
Sambrook J,
Botchan M,
Gallimore P,
Ozanne B,
Pettersson U,
Williams J,
Sharp PA

Cold Spring Harbor Symposia on Quantitative Biology
  39 (0): 615-632; 1974  
[Full Text]

Characterization of Sv40 DNA Rescued from Transformed Mouse Cells
Botchan M,
Ozanne B,
Sambrook J

Cold Spring Harbor Symposia on Quantitative Biology
  39 (0): 95-99; 1974  
[Full Text]

Organization of the chromosome
Kaufmann BP,
McDonald MR,
Gay H,
Belser NO,
Pennoyer JM,
Lennihan MR,
Judge JT

Annual Report of the Director of the Department of Genetics, Carnegie Institution of Washington Year Book No. 49, 1949-1950
  168-177; Dec 15 1950  


Effect of monochromatic ultra-violet radiation on Drosophila melanogaster (Abstract)
Demerec M,
Hollaender A,
Houlahan MB,
Bishop M

Genetics
  27 (1): 139-140; Jan 1942  
[Full Text]

The absorption of ultraviolet radiation by abdominal wall of Drosophila melanogaster (Abstract)
Durand E,
Hollaender A,
Houlahan MB

Genetics
  26 (0): 149; Dec 30 - Jan 1941  
[Full Text]

Ultraviolet absorption spectrum of the abdominal wall of Drosophila melanogaster
Durand E,
Hollaender A,
Houlahan MB

Journal of Heredity, The
  32 (0): 50-56; 1941  



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