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10 Article(s) on File
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Integrative prediction of gene function and platinum-free survival from genomic and epigenetic features in ovarian cancer
Wrzeszczynski KO,
Varadan V,
Kamalakaran S,
Levine DA,
Dimitrova N,
Lucito R

Methods Mol Biol
  1049 (0): 35-51; Aug 2013   NLM
[Abstract]
[DOI] [Full Text]

Translating Next Generation Sequencing to practice: opportunities and necessary steps
Kamalakaran S,
Varadan V,
Janevski A,
Banerjee N,
Tuck D,
McCombie W,
Dimitrova N,
Harris LN

Molecular Oncology
  7 (4): 743-755; Aug 2013   Elsevier
[Abstract]
[DOI] [Full Text]

Major chromosomal breakpoint intervals in breast cancer co-localize with differentially methylated regions
Tang MH,
Varadan V,
Kamalakaran S,
Zhang MQ,
Dimitrova N,
Hicks J

Frontiers in Oncology
  2 (0): 197; Dec 27 2012   NLM
[Abstract]
[DOI] [Full Text]

Identification of Tumor Suppressors and Oncogenes from Genomic and Epigenetic Features in Ovarian Cancer
Wrzeszczynski KO,
Varadan V,
Byrnes J,
Lum E,
Kamalakaran S,
Levine DA,
Dimitrova N,
Zhang MQ,
Lucito R

PLoS ONE
  6 (12): Dec 2011  
[Abstract]
[DOI] [Full Text]

DNA methylation patterns in luminal breast cancers differ from non-luminal subtypes and can identify relapse risk independent of other clinical variables
Kamalakaran S,
Varadan V,
Giercksky Russnes HE,
Levy D,
Kendall JT,
Janevski A,
Riggs M,
Banerjee N,
Synnestvedt M,
Schlichting E,
KÃ¥resen R,
Shama Prasada K,
Rotti H,
Rao R,
Rao L,
Eric Tang MH,
Satyamoorthy K,
Lucito R,
Wigler MH,
Dimitrova N,
Naume B,
Borresen-Dale AL,
Hicks JB

Molecular Oncology
  5 (1): 77-92; Feb 2011  
[Abstract]
[DOI] [Full Text] [PDF]

Pathway and network analysis probing epigenetic influences on chemosensitivity in ovarian cancer
Banerjee N,
Janevski A,
Kamalakaran S,
Varadan V,
Lucito R,
Dimitrova N

  2010   Elsevier
[Abstract]
[DOI] [Full Text]

Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylation
Kamalakaran S,
Kendall JT,
Zhao X,
Tang C,
Khan S,
Ravi K,
Auletta T,
Riggs M,
Wang Y,
Helland A,
Naume B,
Dimitrova N,
Borresen-Dale AL,
Hicks JB,
Lucito R

Nucl. Acids Res.
  37 (12): e89; Jul 2009   PMCID: PMC2709589
[Abstract]
[DOI] [Full Text] [PDF]

Classification method for microarray probe selection using sequence, thermodynamics and secondary structure parameters
Gupta L,
Kumar S,
Singh R,
Shaik R,
Dimitrova N,
Gorthi A,
Lakshmi B,
Pai D,
Kamalakaran S,
Zhao X,
Wigler MH

2008 19th International Conference on Pattern Recognition
  1; Dec 2008  
[Abstract]
[DOI] [Full Text]

53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility
Dimitrova N,
Chen YC,
Spector DL,
de Lange T

Nature
  456 (7221): 524-528; Nov 27 2008  
[Abstract]
[DOI] [Full Text] [PDF]

Computational prediction of methylation status in human genomic sequences
Das R,
Dimitrova N,
Xuan ZY,
Rollins RA,
Haghighi F,
Edwards JR,
Ju JY,
Bestor TH,
Zhang MQ

Proc Natl Acad Sci U S A
  103 (28): 10713-6; Jul 11 2006  
[Abstract]
[DOI] [Full Text] [PDF]


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