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8 Article(s) on File
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Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection
Albert FW,
Hodges E,
Jensen JD,
Besnier F,
Xuan ZY,
Rooks M,
Bhattacharjee A,
Brizuela L,
Good JM,
Green RE,
Burbano HA,
Plyusnina IZ,
Trut L,
Andersson L,
Schoneberg T,
Carlborg O,
Hannon GJ,
Paabo S

Heredity
  107 (3): 205-214; Sep 2011  
[Abstract]
[DOI] [Full Text]

Targeted enrichment of specific regions in the human genome by array hybridization
Igartua C,
Turner EH,
Ng SB,
Hodges E,
Hannon GJ,
Bhattacharjee A,
Rieder MJ,
Nickerson DA,
Shendure J

Current Protocols in Human Genetics
  66 (0): 18.3.1-18.3.14; Jul 2010   PMCID: PMC2910258
[Abstract]
[DOI] [Full Text] [PDF]

Targeted investigation of the neandertal genome by array-based sequence capture
Burbano HA,
Hodges E,
Green RE,
Briggs AW,
Krause J,
Meyer M,
Good JM,
Maricic T,
Johnson PL,
Xuan Z,
Rooks M,
Bhattacharjee A,
Brizuela L,
Albert FW,
De La Rasilla M,
Fortea J,
Rosas A,
Lachmann M,
Hannon GJ,
Paabo S

Science
  328 (5979): 723-725; May 7 2010   PMC3140021
[Abstract]
[DOI] [Full Text] [PDF]

Deep sequencing of target linkage assay-identified regions in familial breast cancer: Methods, analysis pipeline and troubleshooting
Rosa-Rosa JM,
Gracia-Azn√°rez FJ,
Hodges E,
Pita G,
Rooks M,
Xuan Z,
Bhattacharjee A,
Brizuela L,
Silva JM,
Hannon GJ,
Benitez J

PLoS ONE
  5 (4): e9976, 1-10; April 2010  
[Abstract]
[DOI]

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing Dup removed 04/2012
Hodges E,
Smith AD,
Kendall JT,
Xuan Z,
Ravi K,
Rooks M,
Zhang MQ,
Ye K,
Bhattacharjee A,
Brizuela L,
McCombie WR,
Wigler MH,
Hannon GJ,
Hicks JB

Genome Res
  19 (9): 1593-1605; Sep 2009   PMCID: PMC2752124
[Abstract]
[DOI] [Full Text] [PDF]

Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing
Hodges E,
Rooks M,
Xuan Z,
Bhattacharjee A,
Gordon D,
Brizuela L,
McCombie WR,
Hannon GJ

Nat. Protocols
  4 (6): 960-974; May 28 2009  
[Abstract]
[DOI] [Full Text] [PDF]

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
Johnson DS,
Li W,
Gordon DB,
Bhattacharjee A,
Curry B,
Ghosh J,
Brizuela L,
Carroll JS,
Brown M,
Flicek P,
Koch CM,
Dunham I,
Bieda M,
Xu X,
Farnham PJ,
Kapranov P,
Nix DA,
Gingeras TR,
Zhang X,
Holster H,
Jiang N,
Green RD,
Song JS,
McCuine SA,
Anton E,
Nguyen L,
Trinklein ND,
Ye Z,
Ching K,
Hawkins D,
Ren B,
Scacheri PC,
Rozowsky J,
Karpikov A,
Euskirchen G,
Weissman S,
Gerstein M,
Snyder M,
Yang A,
Moqtaderi Z,
Hirsch H,
Shulha HP,
Fu Y,
Weng Z,
Struhl K,
Myers RM,
Lieb JD,
Liu XS

Genome Research
  18 (3): 393-403; 2008  
[Abstract]
[DOI] [Full Text]

Oxygenase Domain of Drosophila melanogaster Nitric Oxide Synthase: Unique Kinetic Parameters Enable a More Efficient NO Release
Ray SS,
Tejero J,
Wang ZQ,
Dutta T,
Bhattacharjee A,
Regulski MR,
Tully T,
Ghosh S,
Stuehr DJ

Biochemistry
  46 (42): 11857-11864; Oct 23 2007  
[Abstract]
[DOI] [Full Text] [PDF]


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